Van Cise, AM, SD Mahaffy, RW Baird, TA Mooney, J Barlow. Song of my people: Dialect differences among sympatric social groups of Hawaiian short-finned pilot whales. In prep.

Van Cise, AM, CS Baker, M Oremus, M Poole, P Rosel, R Fielding, RW Baird, EM Oleson, A Mignucci, S Cerchio, J Marrero, KK Martien, PA Morin. 2017. Genomic phylogeography and taxonomy of a globally-distributed marine species, the short-finned pilot whale. In prep.

Hill, MC, AR Bendlin, AM Van Cise, A Millete-Winfree, AD Ligon, AC Ü, MH Deakos, EM Oleson. Short-finned pilot whales (Globicephala macrorhynchus) of the Marianas: Individual affiliations, movements, and space use. In review.


Van Cise, AM, KK Martien, SD Mahaffy, RW Baird, DL Webster, JH Fowler, EM Oleson, PA Morin. 2017. Familial social structure and socially-driven genetic differentiation in Hawaiian short-finned pilot whales. Molecular Ecology. 266(23): 6730–6741.

Van Cise, AM, MA Roch, TA Mooney, RW Baird, J Barlow. 2017. Acoustic differentiation of Shiho- and Naisa-type short-finned pilot whales in the Pacific Ocean. Journal of the Acoustical Society of America 141(2): 737-748.


Van Cise, AM, PA Morin, RW Baird, AR Lang, KM Robertson, SJ Chivers, RL Brownell, KK Martien. 2016. Redrawing the map:  mtDNA provides new insights into the distribution and diversity of short-finned pilot whales in the Pacific Ocean. Marine Mammal Science 32:1177-1199.

Cammen KM, Andrews KR, Carroll EL, Foote AD, Humble E, Khudyakov JI, Louis M, McGowan MR, Olsen MT, Van Cise AM. 2016. Generating genomic data for non-model organisms: recent trends and lessons learned from marine mammals. Journal of Heredity 107 (6): 481-495(INVITED REVIEW)

Van Cise, AM, PA Morin, RW Baird, EM Oleson, KK Martien. 2016. Relatedness and genetic structure in island-associated and pelagic short-finned pilot whales. Appendix in Hill et al. 2016.  PIFSC Data Report DR-16-01.  36 pp. + Appendix


Morin, PA, AM Van Cise, KK Martien. 2015. Mitogenome phylogeography of short-finned pilot whales in the North Pacific, with reference to the Mariana Islands. Appendix II in Hill et al. 2015. Cetacean Monitoring in the Mariana Islands Range Complex, 2014. Prepared for the U.S. Pacific Fleet Environmental Readiness Office. PIFSC Data Report DR-15-003.  56 pp. + Appendices.


Martien, KK, MC Hill, AM Van Cise, KM Robertson, SM Woodman, L Dollar, VL Pease, EM Oleson. 2014. Genetic diversity and population structure in four species of cetaceans around the Mariana Islands. NOAA-TM-NMFS-SWFSC-536. La Jolla, CA.

2012 and earlier

Bagulayan, A, JN Bartlett-Roa, AL Carter, BG Inman, EM Keen, EC Orenstein, NV Patin, KNS Sato, EC Sibert, AE Simonis, AM Van Cise, and PJS Franks. 2012. Journey to the center of the gyre: the fate of the Tohoku Tsunami debris field. Oceanography 25(2):200–207.

Van Cise, AM (ed.). 2011. AMLR 2009/10 Field Season Report: Objectives, Accomplishments and Tentative Conclusions. NOAA-TM-NMFS-SWFSC-47. La Jolla, CA.

Van Cise, AM (ed.). 2009. AMLR 2008/09 Field Season Report: Objectives, Accomplishments and Tentative Conclusions. NOAA-TM-NMFS-SWFSC-445. La Jolla, CA.